Contributions to collective works (2)
  1. 1. Moles Lopez, X., Debeir, O., Salmon, I., & Decaestecker, C. (2014). Whole slide imaging and analysis for biomarker evaluation in digital pathology. In In: A. Méndez-Vilas (Ed.), Microscopy: advances in scientific research and education (pp. 776-787). Formatex Research Center.
  2. 2. Debeir, O., Adanja, I., Kiss, R., & Decaestecker, C. (2008). Models of cancer cell migration and cellular imaging and analysis. In In: Anja Lambrechts, Christophe Ampe (Eds), The Motile Actin System in Health and Disease (pp. 123-156). Kerala (India): Transworld Research Signpost.
    3.   Peer-reviewed journal articles (257)
  3. 1. Lavis, P., Pingitore, J., Doumont, G., Garabet, A., Van Simaeys, G., Lacroix, S., Passon, N., Van Heymbeek, C., De Maeseneire, C., Allard, J., Collin, A., Huaux, F., Decaestecker, C., Salmon, I., Goldman, S., Cardozo, A. K., & Bondue, B. (2023). Usefulness of FAPα assessment in bronchoalveolar lavage as a marker of fibrogenesis: results of a preclinical study and first report in patients with idiopathic pulmonary fibrosis. Respiratory research, 24(1), 254. doi:10.1186/s12931-023-02556-6
  4. 2. Cassier, P. A., Navaridas, R., Bellina, M., Rama, N., Ducarouge, B., Hernandez-Vargas, H., Delord, J. P., Lengrand, J., Paradisi, A., Fattet, L., Garin, G., Gheit, H., Dalban, C., Pastushenko, I., Neves, D., Jelin, R., Gadot, N., Braissand, N., Léon, S., Degletagne, C., Matias-Guiu, X., Devouassoux-Shisheboran, M., Mery-Lamarche, E., Allard, J., Zindy, E., Decaestecker, C., Salmon, I., Perol, D., Dolcet, X., Ray-Coquard, I., Blanpain, C., Bernet, A., & Mehlen, P. (2023). Netrin-1 blockade inhibits tumour growth and EMT features in endometrial cancer. Nature (London). doi:10.1038/s41586-023-06367-z
  5. 3. Lengrand, J., Pastushenko, I., Vanuytven, S., Song, Y., Venet, D., Sarate, R. M., Bellina, M., Moers, V., Boinet, A., Sifrim, A., Rama, N., Ducarouge, B., Van Herck, J., Dubois, C., Scozzaro, S., Lemaire, S., Gieskes, S., Bonni, S., Collin, A., Braissand, N., Allard, J., Zindy, E., Decaestecker, C., Sotiriou, C., Salmon, I., Mehlen, P., Voet, T., Bernet, A., & Blanpain, C. (2023). Pharmacological targeting of netrin-1 inhibits EMT in cancer. Nature (London). doi:10.1038/s41586-023-06372-2
  6. 4. Racu, M.-L., Bernardi, D., Chaouche, A., Zindy, E., Navez, J., Loi, P., Maris, C., Closset, J., Van Laethem, J.-L., Decaestecker, C., Salmon, I., & D'Haene, N. (2023). SMAD4 Positive Pancreatic Ductal Adenocarcinomas Are Associated with Better Outcomes in Patients Receiving FOLFIRINOX-Based Neoadjuvant Therapy. Cancers (Basel), 15(15). doi:10.3390/cancers15153765
  7. 5. Foucart, A., Debeir, O., & Decaestecker, C. (2023). Panoptic quality should be avoided as a metric for assessing cell nuclei segmentation and classification in digital pathology. Scientific reports, 13(1), 8614. doi:10.1038/s41598-023-35605-7
  8. 6. Lebrun, L., Absil, L., Remmelink, M., De Mendonça, R., D'Haene, N., Gaspard, N., Rusu, S., Racu, M.-L., Collin, A., Allard, J., Zindy, E., Schiavo, A. A., De Clercq, S., De Witte, O., Decaestecker, C., Lopes, M. B., & Salmon, I. (2023). SARS-Cov-2 infection and neuropathological findings: a report of 18 cases and review of the literature. Acta neuropathologica communications, 11(78). doi:10.1186/s40478-023-01566-1
  9. 7. Foucart, A., Debeir, O., & Decaestecker, C. (2023). Evaluating participating methods in image analysis challenges: lessons from MoNuSAC 2020. Pattern recognition., 109600. doi:10.1016/j.patcog.2023.109600
  10. 8. Catteau, X., Zindy, E., Bouri, S., Noël, J. C., Salmon, I., & Decaestecker, C. (2023). Comparison Between Manual and Automated Assessment of Ki-67 in Breast Carcinoma: Test of a Simple Method in Daily Practice. Technology in cancer research & treatment, 22, 15330338231169603. doi:10.1177/15330338231169603
  11. 9. Foucart, A., Debeir, O., & Decaestecker, C. (2022). Shortcomings and areas for improvement in digital pathology image segmentation challenges. Computerized medical imaging and graphics. doi:10.1016/j.compmedimag.2022.102155
  12. 10. Lavis, P., Morra, S., Orte Cano, C., Albayrak, N., Corbiere, V., Olislagers, V., Dauby, N., Del Marmol, V., Marchant, A., Decaestecker, C., Mascart, F., De Vos, N., Van De Borne, P., Salmon, I., Remmelink, M., Parmentier, M., Cardozo, A. K., & Bondue, B. (2022). Chemerin plasma levels are increased in COVID-19 patients and are an independent risk factor of mortality. Frontiers in immunology, 13, 941663. doi:10.3389/fimmu.2022.941663
  13. 11. Martens, C., Rovai, A., Bonatto, D., Metens, T., Debeir, O., Decaestecker, C., Goldman, S., & Van Simaeys, G. (2022). Deep Learning for Reaction-Diffusion Glioma Growth Modeling: Towards a Fully Personalized Model? Cancers (Basel), 14(10), 2530. doi:10.3390/cancers14102530
  14. 12. Foucart, A., Debeir, O., & Decaestecker, C. (2022). Comments on “MoNuSAC2020: A Multi-Organ Nuclei Segmentation and Classification Challenge”. IEEE transactions on medical imaging, 41(4), 997-999. doi:10.1109/TMI.2022.3156023
  15. 13. Racu, M.-L., Lebrun, L., Schiavo, A. A., Van Campenhout, C., De Clercq, S., Absil, L., Minguijon Perez, E., Maris, C., Decaestecker, C., Salmon, I., & D'Haene, N. (2022). The Role of SMAD4 Inactivation in Epithelial-Mesenchymal Plasticity of Pancreatic Ductal Adenocarcinoma: The Missing Link? Cancers (Basel), 14(4). doi:10.3390/cancers14040973
  16. 14. Rusu, S., Verocq, C., Trepant, A.-L., Maris, C., De Nève, N., Blanchard, O., Van Campenhout, C., De Clercq, S., Rorive, S., Cotoi, O. S., Decaestecker, C., Salmon, I., & D'Haene, N. (2021). Immunohistochemistry as an accurate tool for the assessment of BRAF V600E and TP53 mutations in primary and metastatic melanoma. Molecular and clinical oncology, 15(6), 270. doi:10.3892/mco.2021.2432
  17. 15. Martens, C., Lebrun, L., Decaestecker, C., Vandamme, T., Van Eycke, Y.-R., Rovai, A., Metens, T., Debeir, O., Goldman, S., Salmon, I., & Van Simaeys, G. (2021). Initial Condition Assessment for Reaction-Diffusion Glioma Growth Models: A Translational MRI-Histology (In)Validation Study. Tomography, 7(4), 650-674. doi:10.3390/tomography7040055
  18. 16. Lebrun, L., Bizet, M., Melendez Asensio, B., Alexiou, B., Absil, L., Van Campenhout, C., D'Haene, N., Rorive, S., Fuks, F., Decaestecker, C., & Salmon, I. (2021). Analyses of DNA Methylation Profiling in the Diagnosis of Intramedullary Astrocytomas. Journal of neuropathology and experimental neurology, 80(7), 663-673. doi:10.1093/jnen/nlab052
  19. 17. Martens, C., Debeir, O., Decaestecker, C., Metens, T., Lebrun, L., Leurquin-Sterk, G., Trotta, N., Goldman, S., & Van Simaeys, G. (2021). Voxelwise principal component analysis of dynamic [s-methyl-11 c]methionine pet data in glioma patients. Cancers (Basel), 13(10), 2342. doi:10.3390/cancers13102342
  20. 18. Rosenfeld, J., De Smet, Y., Debeir, O., & Decaestecker, C. (2021). Assessing partially ordered clustering in a multicriteria comparative context. Pattern recognition, 114, 107850. doi:10.1016/j.patcog.2021.107850
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